It’s said that Photoshop and LightRoom don’t get the best out of Fuji digital files. That’s because they are a different file format to the standard format used in most cameras. They are X-Trans rather than Bayer.
I decided to try PhotoNinja on a couple of Fuji photos I took last summer, and it does a good job. I’m not sure yet whether it does a better job.
Photograph Works 